Learning meaningful latent representations from nonlinear fMRI data remains a fundamental challenge in neuroimaging analysis. Traditional independent component analysis, widely used due to its ability to estimate interpretable functional brain networks, relies on a linear mixing assumption for latent sources, limiting its ability to capture the inherently nonlinear and complex organization of brain dynamics. More recently, deep representation learning methods have emerged as promising alternatives for modeling nonlinear latent structure. However, many of these approaches have been evaluated primarily on simulated datasets or natural image benchmarks, with comparatively limited validation on real-world neuroimaging data such as fMRI. In this work, we are motivated by the $β$-TCVAE (Total Correlation Variational Autoencoder), a refinement of the $β$-VAE framework for learning latent representations without introducing additional hyperparameters during training. We adapt and modify this model to fMRI data for nonlinear source disentanglement, aiming to separate mixed spatial and temporal brain signals into interpretable components. We show that the $β$-TCVAE framework can recover meaningful nonlinear spatial components with biological relevance, including well-established intrinsic connectivity networks such as the default mode network. Furthermore, we evaluate the learned representations using functional network connectivity, showing that the latent structure captures coherent and interpretable brain organization patterns. This study provides a pilot investigation that bridges nonlinear representation learning and fMRI analysis.

Across many scientific fields, measurements often represent the number of times an event occurs. For example, a document can be represented by word occurrence counts, neural activity by spike counts per time window, or online communication by daily email counts. These measurements yield high-dimensional count data that often approximate a Poisson distribution, frequently with low rates that produce substantial sparsity and complicate downstream analysis. A useful approach is to embed the data into a low-dimensional space that preserves meaningful structure, commonly termed dimensionality reduction. Yet existing dimensionality reduction methods, including both linear (e.g., PCA) and nonlinear approaches (e.g., t-SNE), often assume continuous Euclidean geometry, thereby misaligning with the discrete, sparse nature of low-rate count data. Here, we propose p-SNE (Poisson Stochastic Neighbor Embedding), a nonlinear neighbor embedding method designed around the Poisson structure of count data, using KL divergence between Poisson distributions to measure pairwise dissimilarity and Hellinger distance to optimize the embedding. We test p-SNE on synthetic Poisson data and demonstrate its ability to recover meaningful structure in real-world count datasets, including weekday patterns in email communication, research area clusters in OpenReview papers, and temporal drift and stimulus gradients in neural spike recordings.

Blind-spot mass is a Good-Turing framework for quantifying deployment coverage risk in machine learning. In modern ML systems, operational state distributions are often heavy-tailed, implying that a long tail of valid but rare states is structurally under-supported in finite training and evaluation data. This creates a form of 'coverage blindness': models can appear accurate on standard test sets yet remain unreliable across large regions of the deployment state space. We propose blind-spot mass B_n(tau), a deployment metric estimating the total probability mass assigned to states whose empirical support falls below a threshold tau. B_n(tau) is computed using Good-Turing unseen-species estimation and yields a principled estimate of how much of the operational distribution lies in reliability-critical, under-supported regimes. We further derive a coverage-imposed accuracy ceiling, decomposing overall performance into supported and blind components and separating capacity limits from data limits. We validate the framework in wearable human activity recognition (HAR) using wrist-worn inertial data. We then replicate the same analysis in the MIMIC-IV hospital database with 275 admissions, where the blind-spot mass curve converges to the same 95% at tau = 5 across clinical state abstractions. This replication across structurally independent domains - differing in modality, feature space, label space, and application - shows that blind-spot mass is a general ML methodology for quantifying combinatorial coverage risk, not an application-specific artifact. Blind-spot decomposition identifies which activities or clinical regimes dominate risk, providing actionable guidance for industrial practitioners on targeted data collection, normalization/renormalization, and physics- or domain-informed constraints for safer deployment.

Learning the potentials of interacting particle systems is a fundamental task across various scientific disciplines. A major challenge is that unlabeled data collected at discrete time points lack trajectory information due to limitations in data collection methods or privacy constraints. We address this challenge by introducing a trajectory-free self-test loss function that leverages the weak-form stochastic evolution equation of the empirical distribution. The loss function is quadratic in potentials, supporting parametric and nonparametric regression algorithms for robust estimation that scale to large, high-dimensional systems with big data. Systematic numerical tests show that our method outperforms baseline methods that regress on trajectories recovered via label matching, tolerating large observation time steps. We establish the convergence of parametric estimators as the sample size increases, providing a theoretical foundation for the proposed approach.

Online health communities (OHCs) are vital for fostering peer support and improving health outcomes. Support groups within these platforms can provide more personalized and cohesive peer support, yet traditional support group formation methods face challenges related to scalability, static categorization, and insufficient personalization. To overcome these limitations, we propose two novel machine learning models for automated support group formation: the Group specific Dirichlet Multinomial Regression (gDMR) and the Group specific Structured Topic Model (gSTM). These models integrate user generated textual content, demographic profiles, and interaction data represented through node embeddings derived from user networks to systematically automate personalized, semantically coherent support group formation. We evaluate the models on a large scale dataset from MedHelp, comprising over 2 million user posts. Both models substantially outperform baseline methods including LDA, DMR, and STM in predictive accuracy (held out log likelihood), semantic coherence (UMass metric), and internal group consistency. The gDMR model yields group covariates that facilitate practical implementation by leveraging relational patterns from network structures and demographic data. In contrast, gSTM emphasizes sparsity constraints to generate more distinct and thematically specific groups. Qualitative analysis further validates the alignment between model generated groups and manually coded themes, showing the practical relevance of the models in informing groups that address diverse health concerns such as chronic illness management, diagnostic uncertainty, and mental health. By reducing reliance on manual curation, these frameworks provide scalable solutions that enhance peer interactions within OHCs, with implications for patient engagement, community resilience, and health outcomes.

We revisit the standard perturbation-based approach of Abernethy et al. (2008) in the context of unconstrained Bandit Linear Optimization (uBLO). We show the surprising result that in the unconstrained setting, this approach effectively reduces Bandit Linear Optimization (BLO) to a standard Online Linear Optimization (OLO) problem. Our framework improves on prior work in several ways. First, we derive expected-regret guarantees when our perturbation scheme is combined with comparator-adaptive OLO algorithms, leading to new insights about the impact of different adversarial models on the resulting comparator-adaptive rates. We also extend our analysis to dynamic regret, obtaining the optimal $\sqrt{P_T}$ path-length dependencies without prior knowledge of $P_T$. We then develop the first high-probability guarantees for both static and dynamic regret in uBLO. Finally, we discuss lower bounds on the static regret, and prove the folklore $Ω(\sqrt{dT})$ rate for adversarial linear bandits on the unit Euclidean ball, which is of independent interest.

Data assimilation algorithms estimate the state of a dynamical system from partial observations, where the successful performance of these algorithms hinges on costly parameter tuning and on employing an accurate model for the dynamics. This paper introduces a framework for jointly learning the state, dynamics, and parameters of filtering algorithms in data assimilation through a process we refer to as auto-differentiable filtering. The framework leverages a theoretically motivated loss function that enables learning from partial, noisy observations via gradient-based optimization using auto-differentiation. We further demonstrate how several well-known data assimilation methods can be learned or tuned within this framework. To underscore the versatility of auto-differentiable filtering, we perform experiments on dynamical systems spanning multiple scientific domains, such as the Clohessy-Wiltshire equations from aerospace engineering, the Lorenz-96 system from atmospheric science, and the generalized Lotka-Volterra equations from systems biology. Finally, we provide guidelines for practitioners to customize our framework according to their observation model, accuracy requirements, and computational budget.

This section from Archimedes Palimpsest has a mixture of ancient geometry and Byzantine prayers. The missing page still has traces of geometric diagrams based on Greek mathematician Archimedes of Syracuse's work. Breakthroughs, discoveries, and DIY tips sent six days a week. The Archimedes Palimpsest is a Byzantine prayerbook written in 1229, but the artifact holds more than what immediately meets the eye. The original writing on its pages was erased and replaced--making it a palimpsest--a common practice during the medieval period for expensive writing materials made from animal-skin like parchment.

Heavy-tailed distributions are ubiquitous in real-world data, where rare but extreme events dominate risk and variability. However, standard Variational Autoencoders (VAEs) employ simple decoder distributions (e.g., Gaussian) that fail to capture heavy-tailed behavior, while existing heavy-tail-aware extensions remain restricted to predefined parametric families whose tail behavior is fixed a priori. We propose the Phase-Type Variational Autoencoder (PH-VAE), whose decoder distribution is a latent-conditioned Phase-Type (PH) distribution defined as the absorption time of a continuous-time Markov chain (CTMC). This formulation composes multiple exponential time scales, yielding a flexible and analytically tractable decoder that adapts its tail behavior directly from the observed data. Experiments on synthetic and real-world benchmarks demonstrate that PH-VAE accurately recovers diverse heavy-tailed distributions, significantly outperforming Gaussian, Student-t, and extreme-value-based VAE decoders in modeling tail behavior and extreme quantiles. In multivariate settings, PH-VAE captures realistic cross-dimensional tail dependence through its shared latent representation. To our knowledge, this is the first work to integrate Phase-Type distributions into deep generative modeling, bridging applied probability and representation learning.

The left side shows the effect of pruning of neurons in the weight-matrix of afully-connected layer. The rows in white correspond to neurons pruned in theassociated layer while thecolumns inwhite represent theeffectofremoving neurons from the previous layers. On the right, we allude to the possibility of collapsing the pruned matrix into a smaller,denseone.